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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911676.1_cds_XP_016461720.1_55016
CDS Infomation

[gene=LOC107785015] [db_xref=GeneID:107785015] [protein=chitin elicitor receptor kinase 1-like isoform X1] [protein_id=XP_016461720.1] [location=join(27338..27986,30501..30534,30651..30655,30781..30933,31171..31376,31791..31880,33416..33509,33615..33766,33845..33936,34130..34268,34439..34537,34626..34790)] [gbkey=CDS]
Sequence

ATGTTTGAATCCAAACCAAGAAGTGTGTTACGCTTAGGAATTATCCTAATCCTAGTTTAC
TTATCCTCAATTCCTTTACCAGTTGAGTCAAAATGCAAAAAAGGGTGTGATTTAGCTTTA
GCTTCATTCTATGTATGGCGGGGAACAAGTCTCACTTACATAGCAGAGCTGTTTTCAATC
TCCAGTATAAAAGAAATCGTAGATTACAACAACAATAATATCCCAAATCAGGACAGTGTC
ATAGCAGGGACAAGAATTAACATACCCTTTAGTTGTGATTGTTTGGATGGTGAGTTGTTA
GGCCATGTTTTTCCGTACAAGGTTAAATCTGGAGATACTTATGGTCAGGTTGCGACGAAT
TATTCCGATTTGACAACTTCGGAGTGGTTGATGAAGTTTAATAGCTATCCGGAGAATAAT
ATTCCGGATACAAATGTTACCTTAAACGTGGTAGTGAATTGTTCCTGTGGGGATAGAGAT
GTTTCCAAAGATTATGGGCTGTTTGTGACGTACCCTGTACGGGCAGAGGATAACTTGACG
TCCATTGCTTCTGAGACTAATGTGAGTGCTGATTTAATCCGGAGGTATAATCCAGGGGTG
GATTCCAAATTCGATACTGGTAGAGGGATCCTGTTTATACCGGGAAGAGATAAAAGTGGG
AACTTTCCGCCACTGCCAACAAGCACAGGTATTTCTGGCGGAGCAATAGCTGGGATATCT
ATAGGAGCAATAGCAGTAGTCTTGCTGCTGGCTGGTTTGGTTTACGTAGGATATTATAGG
AAGAAAGCACAAAAGGTTTCGCTGCTCTCTTCCGAAGACCGCCTCCATCAGTCTGGTCAT
GGTCCAGAAGGCAGCACCATAGTTAAAGCTGCAGATTCCCGTCGCCTGGCTGATGGCAAT
TCTCCAGAGCTTTCAGGCATAACGGTGGATAAATCTGTTGAGTTCACTTATGAAGAGCTT
GCTACTGCGACTAATGACTTCAGCATTGCGAACAAAATCGGACAAGGTGGTTTTGGTGCG
GTTTACTATGCTGAGCTCAGAGGCGAGAAAGCGGCTATTAAGAAAATGGACATGGAAGCT
ACAAGGGAGTTTCTTGCTGAATTGAAGGTCTTGACACATGTTCATCACCTGAACCTGGTG
CGCTTGATAGGTTACTGTGTTGAAGGTTCCCTCTTCCTTGTATATGAATACGTTGAGAAT
GGCCACATAGGCCAACATCTGCGTGGTACAGGAAGGGACCCGTTGCCATGGTCTACTAGG
GTTCAAATTGCTCTGGATTCAGCTAGAGGTCTTGAGTACATACATGAGCACACCGTACCA
GTTTACATCCATCGTGATATTAAAACAGCAAATATTCTGATAGACAAAAACTTCCATGCA
AAGGTTGCAGATTTTGGATTAACAAAACTGACTGAAGTTGGAAGTTCTTCTTTGCAAACA
CGACTTGTTGGTACATTTGGATACATGCCTCCAGAGTATGCTCAGTATGGTGATGTTTCT
CCTAAAGTTGATGTCTATGCTTTTGGTGTTGTCCTATATGAACTAATTTCAGCCAAGGAA
GCGATAGTCAAGCCTAATGAATCTGTTACTGAATCAAAGGGTCTTGTTGGTTTGTTTGAA
GAAGTACTTAATCAGCCAGAACCTGAAGAAGACCTTCGCAAACTGGTTGACCCAAGACTT
GGAAATGACTATCCCCTTGATTCAGTCTGCAAGATGGCACAGCTTGCCAAAGCTTGCACC
CATGAAAATCCTCTAATAAGGCCAAGTATGAGATCAATAGTGGTTGCACTGATGACACTT
TCTTCATCGACAGAAGATTGGGATGTTGGATCTTTCTATGGAAACCAAGGTCTAATAAAT
CTTATGTCCGGAAGATAG

Peptide Sequence

PEP ID

XP_016461720.1
PEP Infomation

PREDICTED: chitin elicitor receptor kinase 1-like isoform X1 [Nicotiana tabacum]
Sequence

MFESKPRSVLRLGIILILVYLSSIPLPVESKCKKGCDLALASFYVWRGTSLTYIAELFSI
SSIKEIVDYNNNNIPNQDSVIAGTRINIPFSCDCLDGELLGHVFPYKVKSGDTYGQVATN
YSDLTTSEWLMKFNSYPENNIPDTNVTLNVVVNCSCGDRDVSKDYGLFVTYPVRAEDNLT
SIASETNVSADLIRRYNPGVDSKFDTGRGILFIPGRDKSGNFPPLPTSTGISGGAIAGIS
IGAIAVVLLLAGLVYVGYYRKKAQKVSLLSSEDRLHQSGHGPEGSTIVKAADSRRLADGN
SPELSGITVDKSVEFTYEELATATNDFSIANKIGQGGFGAVYYAELRGEKAAIKKMDMEA
TREFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYVENGHIGQHLRGTGRDPLPWSTR
VQIALDSARGLEYIHEHTVPVYIHRDIKTANILIDKNFHAKVADFGLTKLTEVGSSSLQT
RLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKPNESVTESKGLVGLFE
EVLNQPEPEEDLRKLVDPRLGNDYPLDSVCKMAQLAKACTHENPLIRPSMRSIVVALMTL
SSSTEDWDVGSFYGNQGLINLMSGR

Transcript Sequence

Gene sequence data has not been registered.